LECTURES
Class Notes
The link to the ongoing class notes can be found here.
Note Sign-up
The link to sign up for taking class notes is here. This is required for participation credit. Please submit your notes by emailing them as a PDF to both khoi_c_le@brown.edu and kelley_tu@brown.edu.
Videos
If the video isn’t linked yet, check Brown Panopto or the Media Library in Canvas.
| Date | Topic | Video | Extra Material |
|---|---|---|---|
| 9/10/26 | Intro to CS1810 | video | slides |
| 9/15/26 | Intro to Alignment | video | |
| 9/17/26 | Global Alignment + Scoring Schemes | video | |
| 9/22/26 | Local Alignment | video | |
| 9/24/26 | Local Alignment | video | Katie's Notes |
| 9/29/26 | Affine Gap Alignment | video | |
| 10/01/26 | Affine Gap Alignment | video | |
| 10/06/26 | Statistical Foundations of Alignment | video | |
| 10/08/26 | DAGs and Shortest Path Algorithms | video | |
| 10/15/26 | Multiple Sequence Alignment and AlphaFold2 | video | |
| 10/20/26 | Topological Sorting and Dijkstra's Algorithm | video | |
| 10/22/26 | DFAs and NFAs | video |
